miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|289074340|gb|GW494538.1|GW494538 AAACGTTTTATTCATTAAATTTTCAGACTTTCCAAATAGCAGATGCATATTTTTTCAGACATTAAATATCAAGTATTATC
ATTTAATATCCCCAGATTCTATCATAAATAAATATATAAATGTTTAATACAATAAGGGCCATTTTTACAATGTTTGGTTA
GTGCCTGATAACACTAACCGGAAGAATTTAACAATAGAATTCTACCGGTTAGTCTTTACCGACACTTAGCCGGACATTGT
AAGAACGGCCCTAAAAATGATTTTAAAAATAAATGTATTAATTTAAATGTCATAATCTAAACATCTGAATTAGATAATTT
AGATTATTACTTTGTTGGCTATAAAATAATAAGTAAATATAAAATACGAATGTTTTGTATAACATATTATACATTTTAAA
CCTTATAATTTTGTACAAATTTACACTAATGAAGTAATTTATACATGGAAATAAATTTTATTATACTTCTATTAAACAGC
TAAAATGTAGATCAATTTATATTGTCATTCCTTTGCAATGCACAATAAATTCTGAGACTGGATCATTTTCTCCATCACAT
CTCATTGTACCAGTTATTTCTTCATTTTCAACAATTGGTAAAAATAAATCAACGAATTCAACTGAATAAGGAGGAGAAAC
TGCTTCCAAAGCTTCTGTAACAAAATAACGTATCAAAGAAATATCAGTATCTCCTCTATGCCAACATTGTTCGATA




Most similar to sp|Q24134|NELFD_DROME

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q24134|NELFD_DROME Negative elongation factor D OS=Drosophila
           melanogaster GN=TH1 PE=1 SV=2
          Length = 578

 Score =  108 bits (269), Expect = 5e-23
 Identities = 52/68 (76%), Positives = 58/68 (85%)
 Frame = -2

Query: 715 IEQCWHRGDTDISLIRYFVTEALEAVSPPYSVEFVDLFLPIVENEEITGTMRCDGENDPV 536
           I+QC    DTDISLIRYFVTE LE ++ PYS EFV LFLP+VENEEITGTMR +G+NDPV
Sbjct: 505 IKQCCAIEDTDISLIRYFVTEVLETITHPYSPEFVQLFLPMVENEEITGTMRGEGDNDPV 564

Query: 535 SEFIVHCK 512
           SEFIVHCK
Sbjct: 565 SEFIVHCK 572